CDS

Accession Number TCMCG017C04843
gbkey CDS
Protein Id OMP08543.1
Location join(28357..28644,28750..28833,29002..29067,29240..29312,29674..30062,30167..30207,30526..30589,30724..30810,30974..31258)
Organism Corchorus olitorius
locus_tag COLO4_06373

Protein

Length 458aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012667.1
Definition hypothetical protein COLO4_06373 [Corchorus olitorius]
Locus_tag COLO4_06373

EGGNOG-MAPPER Annotation

COG_category S
Description U11 U12 small nuclear ribonucleoprotein 59 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0031960        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043065        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048545        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051384        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070228        [VIEW IN EMBL-EBI]
GO:0070230        [VIEW IN EMBL-EBI]
GO:0070232        [VIEW IN EMBL-EBI]
GO:0070234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000106        [VIEW IN EMBL-EBI]
GO:2000108        [VIEW IN EMBL-EBI]
GO:2001233        [VIEW IN EMBL-EBI]
GO:2001235        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAAAAAATGGGTCAACTGACCCTTCTGTTTCTGAGTTCTTGAAGTATCTAGAAGATAGGGGAATTGATTTAGAAACTCAAGAATTACTTTCTACGGAAGCGGCTAATTCTTTGATGTCAAAGCTAAGAGCTCAGTTGGAGCCATTTAGATATGTTGTGGATGAAGCCAGCCCATGGGAGGAGAAATCAGCAACAGCTCAACTGGCCAATAAAATCAACAAGTCGAAAAGGAATAAACTATGGAGGAAGAGAAAGAGGAGACGAATTGCAGAATTGCTTGCAAAGGAACGTGAACAATTTGACCAAGCTGATAGAGAAGCTGATGAATGGAGAGCTAGGGAGATTGCCAAGGACATTGCAAGCCGCAAGGTCGAAAAGATGAAGGAAATAGCAAAACTCAAAGCCAAGGAAGAAAAAAAGAAACTAGAATCTGAGCTTGAGCTAGTTTTAATGGTGGAAAAGTTGCAAGAATTGCGCTCCATCAGGGTCCAGAAATTGAAGAAACAAGGCCATTTTCTCCCAGAGGAGGATGATAAATTTCTTGATAAAGTTCGCGCTGCAGTTGAGGAAGAGGAGAGACAAGCTTTAGCAGCAGCTGATACAGATGCTGCTAAAGATGCCATTGCAACTGCCGAGGAATCTAGGAAAGCCACTCAGATTCAAAGGCCCCTTGCAGGAGATCTTATCAGTGATCAACTAGAAAACAAGGAGAGCAAAGACCAAACAGCACCAAATGAGGATGAAAAGGACTCTACTACAGCCACTGATAAGGAATCTGGCATAAATACATCAGAAGGACATGGTTACCGTGGGGCATATGATTCTTTGGCCAATTTACCAATTGAATTTTATCACTATTACCATGGCAGCAATACTGATATGGGCACACTTATTGAGGTTAGAAGGACATGGGATGCTTATATCAGACCGGTTGGAAGCCGTATACCAGGTCACTGGGTTCAACCACCCCCACCAGCTGATGAGATATGGGCATCCTATTTGTTTAGGCGGGTTTATGCACCCAAATGTCTCTCCTTTCTGAGCTGTGGTACACTTTTATTTAACTATGCAGATACATTAGTTTTCAAGGCTGAATTTGACTATGAACTCCAATATTCTTGCATCGTCCTCATTGTCAAAGTAGTTCCAATTATTTTTCAAATTTCTCCTCTTTTGAGGAATAAGAAAGGAGGCAAAGGCAGAGCCTTTTGTACAGAAAGGAATGTAGCCGAGGGTTCAAGACGCTCCAAAAATGGACTAATTGGGCATCCTACGATTCGGCAAAATTCATTTGCGAAGGCTTTTTATAACATTGTTAGAGAGGTCTCAATTCATAGAGTACTCACCTCCCTGCTGGGACCTTCGCCAGTTTAA
Protein:  
MIKNGSTDPSVSEFLKYLEDRGIDLETQELLSTEAANSLMSKLRAQLEPFRYVVDEASPWEEKSATAQLANKINKSKRNKLWRKRKRRRIAELLAKEREQFDQADREADEWRAREIAKDIASRKVEKMKEIAKLKAKEEKKKLESELELVLMVEKLQELRSIRVQKLKKQGHFLPEEDDKFLDKVRAAVEEEERQALAAADTDAAKDAIATAEESRKATQIQRPLAGDLISDQLENKESKDQTAPNEDEKDSTTATDKESGINTSEGHGYRGAYDSLANLPIEFYHYYHGSNTDMGTLIEVRRTWDAYIRPVGSRIPGHWVQPPPPADEIWASYLFRRVYAPKCLSFLSCGTLLFNYADTLVFKAEFDYELQYSCIVLIVKVVPIIFQISPLLRNKKGGKGRAFCTERNVAEGSRRSKNGLIGHPTIRQNSFAKAFYNIVREVSIHRVLTSLLGPSPV